Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845871.1_cds_XP_016509468.1_22399
CDS Infomation

[gene=LOC107826937] [db_xref=GeneID:107826937] [protein=pentatricopeptide repeat-containing protein At2g17140-like] [protein_id=XP_016509468.1] [location=complement(join(133193..133304,133977..136468))] [gbkey=CDS]
Sequence

ATGGAGCAGCAAACCAAAACGCTAACCAAAGCATTAATCAAGAACTCCAGCAACCCCAAG
CTGGCATGGCAACTCTTCAAACGCACTCTCTCAACTCCAAATCCTCCCCTCTATTCAATC
CCTTCCCTAACCCGTATCCTCCTCCATTCCCAAATGCTTTCCGAAATCCACACACTTCAC
TCTTTCCTCCTTTCTCTATCCCCTCAAATCTCCCTTCCTTCTCAATACACCCTCGTCAAG
CTCGTAGCAACTTACGGATATATTCAAGATGCCATTTCTCTCTTCAAATCTACTCGCTCT
CACTTACCTCATCAACCACCACCCAATGTATCACTCTACAATTTGCTTATGCATAAGTCT
TTGAAATTTGATTGTCCGAATTTCTTGTCTTGGTTGTACAAAGATATGATTTCTGCTTGC
GTTTCGCCTGTTACTTATACTTTTAACCTTCTCATTGGCGGGTTGTGTAATTCGAATCGT
TTGGGAGATGCCCGCCACCTGTTTGATGTTATGCGCGAGAAAGGGTGTCAGCCTAATGAG
TTTACTTTTGGGATTTTGATTCGTGGCTATTGTGAATTTGGGCTTCCTTTAGAAGGTTTG
AAACTTCTGGATATGATGAAAATGATGGGCGTTTGTCCTAACGTGATAATATCCAATACT
TTGATTGCCAGTTTCTGCAAGAAAGGTGATGTTGATGACGCTGAGAGGTTGGTCGAGAGG
ATGAGGGAGGATGGGCTTGTTCCTGATGTTGTTACCTTCAATTCTAGAATTTCAGCTCTT
TGCAACTCGGGGAAGATTCTTGAGGCTTCCAGAATTTTCAGGGATATGCAAATAGATGAG
GTATTCGACTTGCCAAGGCCGAATGTTGTAACTTTCAATTTGATGTTGCAGGGGTTTTGT
GAGAGAGGGATGCTTGAAGATGCGAGGACACTGACTGAGTCTATGAAGAAAGATGGTATT
TTCTTCAATGTGCAGAGCTACAATATCTGGTTGTGTGGGTTGGTGAAGAATAAAAAGATG
TTGGAGGCTCAATCAGTGCTGAAAGAGATGTCGGAGAATGGAGTAGCTCCCACGATATAT
TCTTATAACATTGTGATTGATGGCCTCTGCAAGAATGGGATGCTTGGTGATGCCAAAATG
CTGATGAGCTTAATGGTAAGTGATGGTAAATTTCCAGATACAGTCACTTATAGCACTCTA
CTCCATGGCTACTCCATGAAAAGTAAAGTGACTGAGGCAAAGAATATTCTGCATGAGATG
ATGAAGAGAGGCTGCATTCCAAATACGTACACTTGTAATACTCTGCTTCATAGCATGTGG
AAAGAAGGGAAAATATCAGAGGCGCAGCAGTTACTGCAGAAGATGAATGAGAGAGGTTAT
GGCCTGGATATTGTGAGTTGCAACATAGTGATTCATGGTCTCTGCCGAACTGGAGAAGTG
GACAAAGCTGTCGAGATTGTGAGTGAAATGTGGAGCCACGGAAGTGCTGCGCTTGGTGAT
CTTGGAAAGTCGTTTATGAGCTTGGTTAATGAAGATGATCATGGGAGGAAATGCCTGCCC
GACTTGATCACCTATTCAACCATAATTAGCAGTTTATTCAGAGAAGGGAAGCTTGATGAA
GCTAAGAAGAAGTTTCTTGAGATGATGGGAAAGAAGTTGTACCCTGATTCAATTATTTAT
AATACTATTTTACATCATCTGTGTAAAAGAGGAAAGGTATCATCTGCATTTCAGGTTCTA
AAGGACATGGAGAAGAAAGGTTGTAACAAGAGCTTACGAACTTATAATTCTTTGATACTC
GGGTTGGGGAGCAAAAATCAAATATTCGAAATGTGTGACCTGATGGATGAAATGCGAGAA
AAAGGGATTTCTCCAAATGTTTACACGTACAATATCATGACTAGCTGTCTATGCAAATCT
GGGAGAACTGAAGAAGCAATTTCTCTTTTGAATGAAATGTTACAGAAAGGAATAATTCCT
AATCTGCATATCTTTGAGTTGCTTATTACATCATATTGCAGGACTGGTGAGTTCAGACCA
GCTCAGGAGGTATTTGATATAGCCTTGAGTATATGTGGTCACAAGGAAGCGCTCTATGCA
CTGATGTTCAATGAATATCTTGCTGGAGGTGAAATCTTGGAAGCTAAGCAATTACTGGAA
ACTGCATTAGATAAACGCTTTGATCTAGGAAGCTTCCTTTACAAAGATCTTATTGACAAG
CTTTCTAATGAGGAGAATTTAGAAGGTGCTCATGATATTCTCACCAGGATGATGGACATA
GGATATGCGTTTAATCCTGCATCATTCATGCCAGTCATTGATGGTTTACGTAAATTGGGT
AATAAGCAGGAGGCAGATGAACTAGCGGAGAGGATGCTGGAGATGGTTTCAGAAGGTAAG
GTGGGTAACAAAGCTTACCAAAACTATAGGGAGTTAAATCATGCGAAGCGAAGCAAATAT
GGTGGAGATGGTTGGCAGGCAATTGTGCACAGAGACGATGGAAGTGCAGCAGCCTTGAAA
AATTTGAAGCGGGTGCAGAAAGGATGGGGTCAAGGAAGTGTATCAAGTCTCCGAACTCCC
AAAAATGAAATTCTGGATGACTAG

Peptide Sequence

PEP ID

XP_016509468.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like [Nicotiana tabacum]
Sequence

MEQQTKTLTKALIKNSSNPKLAWQLFKRTLSTPNPPLYSIPSLTRILLHSQMLSEIHTLH
SFLLSLSPQISLPSQYTLVKLVATYGYIQDAISLFKSTRSHLPHQPPPNVSLYNLLMHKS
LKFDCPNFLSWLYKDMISACVSPVTYTFNLLIGGLCNSNRLGDARHLFDVMREKGCQPNE
FTFGILIRGYCEFGLPLEGLKLLDMMKMMGVCPNVIISNTLIASFCKKGDVDDAERLVER
MREDGLVPDVVTFNSRISALCNSGKILEASRIFRDMQIDEVFDLPRPNVVTFNLMLQGFC
ERGMLEDARTLTESMKKDGIFFNVQSYNIWLCGLVKNKKMLEAQSVLKEMSENGVAPTIY
SYNIVIDGLCKNGMLGDAKMLMSLMVSDGKFPDTVTYSTLLHGYSMKSKVTEAKNILHEM
MKRGCIPNTYTCNTLLHSMWKEGKISEAQQLLQKMNERGYGLDIVSCNIVIHGLCRTGEV
DKAVEIVSEMWSHGSAALGDLGKSFMSLVNEDDHGRKCLPDLITYSTIISSLFREGKLDE
AKKKFLEMMGKKLYPDSIIYNTILHHLCKRGKVSSAFQVLKDMEKKGCNKSLRTYNSLIL
GLGSKNQIFEMCDLMDEMREKGISPNVYTYNIMTSCLCKSGRTEEAISLLNEMLQKGIIP
NLHIFELLITSYCRTGEFRPAQEVFDIALSICGHKEALYALMFNEYLAGGEILEAKQLLE
TALDKRFDLGSFLYKDLIDKLSNEENLEGAHDILTRMMDIGYAFNPASFMPVIDGLRKLG
NKQEADELAERMLEMVSEGKVGNKAYQNYRELNHAKRSKYGGDGWQAIVHRDDGSAAALK
NLKRVQKGWGQGSVSSLRTPKNEILDD

Transcript Sequence

Gene sequence data has not been registered.